Perform meta-analysis of GWAS summary statistics datasets cleaned by tidyGWAS This function is depreciated. Use meta_analyse()

Perform meta-analysis of GWAS summary statistics datasets cleaned by tidyGWAS This function is depreciated. Use meta_analyse()

Usage

deprec_meta_analyze(
  dset,
  by = c("CHR", "POS_37", "RSID", "EffectAllele", "OtherAllele"),
  ref = c("REF_37", "REF_38")
)

Arguments

dset

an arrow::open_dataset() object

by

a character vector of column names to group by. Default is c("CHR", "POS", "RSID", "EffectAllele", "OtherAllele")

ref

either "REF_37" or "REF_38", depending on which column you want to use to standardize reference allele

Value

a dplyr::tibble()

Examples

if (FALSE) { # \dontrun{
dset <- arrow::open_dataset("path_to/sumstats/")
res <- meta_analyze(dset)
} # }